CHAF1A

CHAF1A
Identifiers
Aliases	CHAF1A, CAF-1, CAF1, CAF1B, CAF1P150, P150, chromatin assembly factor 1 subunit A
External IDs	OMIM: 601246; MGI: 1351331; GeneCards: CHAF1A
Available structures
PDB	Ortholog search: PDBe RCSB
List of PDB id codes
	1S4Z
Gene location (Human)
Chr.	Chromosome 19 (human)
End	4,445,018 bp
Gene location (Mouse)
Chr.	Chromosome 17 (mouse)
End	56,379,289 bp
RNA expression pattern
	Top expressed in
	secondary oocyte; ; sural nerve; ; ventricular zone; ; nipple; ; embryo; ; ganglionic eminence; ; gingival epithelium; ; pylorus; ; amniotic fluid; ; Skeletal muscle tissue of rectus abdominis;
	Top expressed in
	primary oocyte; ; secondary oocyte; ; embryonic cell; ; zygote; ; bone marrow; ; yolk sac; ; epiblast; ; tail of embryo; ; otic vesicle; ; testicle;
	More reference expression data
	; ; ; ;
	More reference expression data
Gene ontology
Molecular function	unfolded protein binding; chromatin binding; protein binding; chromo shadow domain binding; identical protein binding;
Cellular component	CAF-1 complex; nucleus; protein-containing complex;
Biological process	DNA replication; cell cycle; DNA repair; cellular response to DNA damage stimulus; DNA replication-dependent chromatin assembly; nucleosome assembly;
	Sources:Amigo / QuickGO
Orthologs
Databases	NCBI: entry; OMA: entry
	10036
	27221
	ENSG00000167670
	ENSMUSG00000002835
	Q13111
	Q9QWF0
	NM_005483
	NM_013733
	NP_005474
	NP_038761
	Wikidata
View/Edit Human	View/Edit Mouse

Chromatin assembly factor 1 subunit A is a protein that in humans is encoded by the CHAF1A gene.

Function

Chromatin assembly factor I (CAF-1) is a nuclear complex consisting of p50, p60 (CHAF1B; MIM 601245), and p150 (CHAF1A) subunits that assembles histone tetramers onto replicating DNA in vitro (Kaufman et al., 1995).[supplied by OMIM]

Interactions

CHAF1A has been shown to interact with:

ASF1A,
ASF1B,
BLM,
CBX5, and
MBD1.

References

1 2 3 GRCh38: Ensembl release 89: ENSG00000167670 – Ensembl, May 2017
1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000002835 – Ensembl, May 2017
↑ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
↑ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
↑ Kaufman PD, Kobayashi R, Kessler N, Stillman B (August 1995). "The p150 and p60 subunits of chromatin assembly factor I: a molecular link between newly synthesized histones and DNA replication". Cell. 81 (7): 1105–14. doi:10.1016/S0092-8674(05)80015-7. PMID 7600578. S2CID 13502921.
1 2 "Entrez Gene: CHAF1A chromatin assembly factor 1, subunit A (p150)".
1 2 Mello JA, Silljé HH, Roche DM, Kirschner DB, Nigg EA, Almouzni G (April 2002). "Human Asf1 and CAF-1 interact and synergize in a repair-coupled nucleosome assembly pathway". EMBO Rep. 3 (4): 329–34. doi:10.1093/embo-reports/kvf068. PMC 1084056. PMID 11897662.
↑ Ewing RM, Chu P, Elisma F, Li H, Taylor P, Climie S, McBroom-Cerajewski L, Robinson MD, O'Connor L, Li M, Taylor R, Dharsee M, Ho Y, Heilbut A, Moore L, Zhang S, Ornatsky O, Bukhman YV, Ethier M, Sheng Y, Vasilescu J, Abu-Farha M, Lambert JP, Duewel HS, Stewart II, Kuehl B, Hogue K, Colwill K, Gladwish K, Muskat B, Kinach R, Adams SL, Moran MF, Morin GB, Topaloglou T, Figeys D (2007). "Large-scale mapping of human protein-protein interactions by mass spectrometry". Mol. Syst. Biol. 3 89. doi:10.1038/msb4100134. PMC 1847948. PMID 17353931.
↑ Jiao R, Bachrati CZ, Pedrazzi G, Kuster P, Petkovic M, Li JL, Egli D, Hickson ID, Stagljar I (June 2004). "Physical and functional interaction between the Bloom's syndrome gene product and the largest subunit of chromatin assembly factor 1". Mol. Cell. Biol. 24 (11): 4710–9. doi:10.1128/MCB.24.11.4710-4719.2004. PMC 416397. PMID 15143166.
1 2 Reese BE, Bachman KE, Baylin SB, Rountree MR (May 2003). "The methyl-CpG binding protein MBD1 interacts with the p150 subunit of chromatin assembly factor 1". Mol. Cell. Biol. 23 (9): 3226–36. doi:10.1128/mcb.23.9.3226-3236.2003. PMC 153189. PMID 12697822.
↑ Lechner MS, Begg GE, Speicher DW, Rauscher FJ (September 2000). "Molecular determinants for targeting heterochromatin protein 1-mediated gene silencing: direct chromoshadow domain-KAP-1 corepressor interaction is essential". Mol. Cell. Biol. 20 (17): 6449–65. doi:10.1128/mcb.20.17.6449-6465.2000. PMC 86120. PMID 10938122.

External links

CHAF1A human gene location in the UCSC Genome Browser.
CHAF1A human gene details in the UCSC Genome Browser.

This article on a gene on human chromosome 19 is a stub. You can help Wikipedia by adding missing information.

[refGRCh38Ensembl-1] 1 2 3 GRCh38: Ensembl release 89: ENSG00000167670 – Ensembl, May 2017

[refGRCm38Ensembl-2] 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000002835 – Ensembl, May 2017

[3] "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[4] "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[pmid7600578-5] Kaufman PD, Kobayashi R, Kessler N, Stillman B (August 1995). "The p150 and p60 subunits of chromatin assembly factor I: a molecular link between newly synthesized histones and DNA replication". Cell. 81 (7): 1105–14. doi:10.1016/S0092-8674(05)80015-7. PMID 7600578. S2CID 13502921.

[entrez-6] 1 2 "Entrez Gene: CHAF1A chromatin assembly factor 1, subunit A (p150)".

[pmid11897662-7] 1 2 Mello JA, Silljé HH, Roche DM, Kirschner DB, Nigg EA, Almouzni G (April 2002). "Human Asf1 and CAF-1 interact and synergize in a repair-coupled nucleosome assembly pathway". EMBO Rep. 3 (4): 329–34. doi:10.1093/embo-reports/kvf068. PMC 1084056. PMID 11897662.

[pmid17353931-8] Ewing RM, Chu P, Elisma F, Li H, Taylor P, Climie S, McBroom-Cerajewski L, Robinson MD, O'Connor L, Li M, Taylor R, Dharsee M, Ho Y, Heilbut A, Moore L, Zhang S, Ornatsky O, Bukhman YV, Ethier M, Sheng Y, Vasilescu J, Abu-Farha M, Lambert JP, Duewel HS, Stewart II, Kuehl B, Hogue K, Colwill K, Gladwish K, Muskat B, Kinach R, Adams SL, Moran MF, Morin GB, Topaloglou T, Figeys D (2007). "Large-scale mapping of human protein-protein interactions by mass spectrometry". Mol. Syst. Biol. 3 89. doi:10.1038/msb4100134. PMC 1847948. PMID 17353931.

[pmid15143166-9] Jiao R, Bachrati CZ, Pedrazzi G, Kuster P, Petkovic M, Li JL, Egli D, Hickson ID, Stagljar I (June 2004). "Physical and functional interaction between the Bloom's syndrome gene product and the largest subunit of chromatin assembly factor 1". Mol. Cell. Biol. 24 (11): 4710–9. doi:10.1128/MCB.24.11.4710-4719.2004. PMC 416397. PMID 15143166.

[pmid12697822-10] 1 2 Reese BE, Bachman KE, Baylin SB, Rountree MR (May 2003). "The methyl-CpG binding protein MBD1 interacts with the p150 subunit of chromatin assembly factor 1". Mol. Cell. Biol. 23 (9): 3226–36. doi:10.1128/mcb.23.9.3226-3236.2003. PMC 153189. PMID 12697822.

[pmid10938122-11] Lechner MS, Begg GE, Speicher DW, Rauscher FJ (September 2000). "Molecular determinants for targeting heterochromatin protein 1-mediated gene silencing: direct chromoshadow domain-KAP-1 corepressor interaction is essential". Mol. Cell. Biol. 20 (17): 6449–65. doi:10.1128/mcb.20.17.6449-6465.2000. PMC 86120. PMID 10938122.

CHAF1A

Function

Interactions

References

Further reading

External links