FAM50A

FAM50A

Identifiers

FAM50A, 9F, DXS9928E, HXC-26, HXC26, XAP5, family with sequence similarity 50 member A, MRXSA

External IDs

OMIM: 300453; MGI: 1351626; GeneCards: FAM50A

Gene location (Human)

Chr.	X chromosome (human)

Band	Xq28	Start	154,444,141 bp
Band	Xq28	End	154,450,654 bp

Gene location (Mouse)

Chr.	X chromosome (mouse)

Band	X\|X A7.3	Start	73,356,639 bp
Band	X\|X A7.3	End	73,363,755 bp

RNA expression pattern

Human

Mouse (ortholog)

Top expressed in

sural nerve

anterior pituitary

stromal cell of endometrium

tendon of biceps brachii

C1 segment

right lobe of thyroid gland

left lobe of thyroid gland

apex of heart

right hemisphere of cerebellum

muscle layer of sigmoid colon

Top expressed in

saccule

otic placode

otic vesicle

primary oocyte

neural layer of retina

zygote

endocardial cushion

morula

morula

granulocyte

More reference expression data


More reference expression data

Gene ontology
Molecular function	RNA binding
Cellular component	nucleus nucleoplasm
Biological process	spermatogenesis
Sources:Amigo / QuickGO

Databases

NCBI: entry; OMA: entry

Species

Human

Mouse


9130


108160


ENSG00000071859


ENSMUSG00000001962


Q14320


Q9WV03

RefSeq (mRNA)


NM_004699


NM_138607

RefSeq (protein)


NP_004690


NP_613073

Location (UCSC)

Chr X: 154.44 – 154.45 Mb

Chr X: 73.36 – 73.36 Mb

PubMed search

View/Edit Human

View/Edit Mouse

Protein FAM50A is a protein that in humans is encoded by the FAM50A gene.

References

1 2 3 GRCh38: Ensembl release 89: ENSG00000071859 – Ensembl, May 2017
1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000001962 – Ensembl, May 2017
↑ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
↑ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
↑ Mazzarella R, Pengue G, Yoon J, Jones J, Schlessinger D (Nov 1997). "Differential expression of XAP5, a candidate disease gene". Genomics. 45 (1): 216–9. doi:10.1006/geno.1997.4912. PMID 9339379.
↑ Toyoda A, Sakai T, Sugiyama Y, Kusuda J, Hashimoto K, Maeda H (May 1997). "Isolation and analysis of a novel gene, HXC-26, adjacent to the rab GDP dissociation inhibitor gene located at human chromosome Xq28 region". DNA Res. 3 (5): 337–40. doi:10.1093/dnares/3.5.337. PMID 9039504.
↑ "Entrez Gene: FAM50A family with sequence similarity 50, member A".

Further reading

Chen EY, Zollo M, Mazzarella R, et al. (1997). "Long-range sequence analysis in Xq28: thirteen known and six candidate genes in 219.4 kb of high GC DNA between the RCP/GCP and G6PD loci". Hum. Mol. Genet. 5 (5): 659–68. doi:10.1093/hmg/5.5.659. PMID 8733135.
Sedlacek Z, Münstermann E, Dhorne-Pollet S, et al. (1999). "Human and mouse XAP-5 and XAP-5-like (X5L) genes: identification of an ancient functional retroposon differentially expressed in testis". Genomics. 61 (2): 125–32. doi:10.1006/geno.1999.5931. PMID 10534398.
Hartley JL, Temple GF, Brasch MA (2001). "DNA cloning using in vitro site-specific recombination". Genome Res. 10 (11): 1788–95. doi:10.1101/gr.143000. PMC 310948. PMID 11076863.
Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
Wiemann S, Arlt D, Huber W, et al. (2004). "From ORFeome to biology: a functional genomics pipeline". Genome Res. 14 (10B): 2136–44. doi:10.1101/gr.2576704. PMC 528930. PMID 15489336.
Ross MT, Grafham DV, Coffey AJ, et al. (2005). "The DNA sequence of the human X chromosome". Nature. 434 (7031): 325–37. Bibcode:2005Natur.434..325R. doi:10.1038/nature03440. PMC 2665286. PMID 15772651.
Mehrle A, Rosenfelder H, Schupp I, et al. (2006). "The LIFEdb database in 2006". Nucleic Acids Res. 34 (Database issue): D415–8. doi:10.1093/nar/gkj139. PMC 1347501. PMID 16381901.

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