GPANK1

GPANK1
Identifiers
Aliases	GPANK1, ANKRD59, BAT4, D6S54E, G5, GPATCH10, G-patch domain and ankyrin repeats 1
External IDs	OMIM: 142610; MGI: 2148975; GeneCards: GPANK1
Gene location (Human)
Chr.	Chromosome 6 (human)
End	31,666,283 bp
Gene location (Mouse)
Chr.	Chromosome 17 (mouse)
End	35,343,790 bp
RNA expression pattern
	Top expressed in
	left testis; ; right testis; ; apex of heart; ; blood; ; sural nerve; ; gastrocnemius muscle; ; gonad; ; Achilles tendon; ; left ventricle; ; muscle of thigh;
	Top expressed in
	epithelium of small intestine; ; intestinal villus; ; Ileal epithelium; ; spermatid; ; granulocyte; ; bone marrow; ; inferior colliculi; ; spermatocyte; ; superior colliculus; ; testicle;
	More reference expression data
	n/a
Orthologs
Databases	NCBI: entry; OMA: entry
	7918
	81845
ENSG00000236011; ENSG00000206408; ENSG00000204438; ENSG00000223932; ENSG00000228605;
	ENSG00000232312; ENSG00000233210
	ENSMUSG00000092417
	O95872
	Q61858
	NM_001199237; NM_001199238; NM_001199239; NM_001199240; NM_033177
	NM_001128597; NM_032460
	NP_001186166; NP_001186167; NP_001186168; NP_001186169; NP_149417
	NP_001122069; NP_115849
	Wikidata
View/Edit Human	View/Edit Mouse

G patch domain and ankyrin repeat-containing protein 1 is a protein that in humans is encoded by the GPANK1 gene (previously BAT4).

A cluster of genes, BAT1-BAT5, has been localized in the vicinity of the genes for TNF alpha and TNF beta. These genes are all within the human major histocompatibility complex class III region. The protein encoded by this gene is thought to be involved in some aspects of immunity.

References

1 2 3 ENSG00000206408, ENSG00000204438, ENSG00000223932, ENSG00000228605, ENSG00000232312, ENSG00000233210 GRCh38: Ensembl release 89: ENSG00000236011, ENSG00000206408, ENSG00000204438, ENSG00000223932, ENSG00000228605, ENSG00000232312, ENSG00000233210 – Ensembl, May 2017
1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000092417 – Ensembl, May 2017
↑ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
↑ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
↑ Spies T, Blanck G, Bresnahan M, Sands J, Strominger JL (Feb 1989). "A new cluster of genes within the human major histocompatibility complex". Science. 243 (4888): 214–7. Bibcode:1989Sci...243..214S. doi:10.1126/science.2911734. PMID 2911734.
↑ Spies T, Bresnahan M, Strominger JL (Dec 1989). "Human major histocompatibility complex contains a minimum of 19 genes between the complement cluster and HLA-B". Proc Natl Acad Sci U S A. 86 (22): 8955–8. Bibcode:1989PNAS...86.8955S. doi:10.1073/pnas.86.22.8955. PMC 298409. PMID 2813433.
1 2 "Entrez Gene: BAT4 HLA-B associated transcript 4".

External links

Human GPANK1 genome location and GPANK1 gene details page in the UCSC Genome Browser.

Rual JF, Venkatesan K, Hao T, et al. (2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8. Bibcode:2005Natur.437.1173R. doi:10.1038/nature04209. PMID 16189514. S2CID 4427026.
Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
Xie T, Rowen L, Aguado B, et al. (2004). "Analysis of the gene-dense major histocompatibility complex class III region and its comparison to mouse". Genome Res. 13 (12): 2621–36. doi:10.1101/gr.1736803. PMC 403804. PMID 14656967.
Mungall AJ, Palmer SA, Sims SK, et al. (2003). "The DNA sequence and analysis of human chromosome 6". Nature. 425 (6960): 805–11. Bibcode:2003Natur.425..805M. doi:10.1038/nature02055. PMID 14574404.
Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.

This article on a gene on human chromosome 6 is a stub. You can help Wikipedia by adding missing information.

[refGRCh38Ensembl-1] 1 2 3 ENSG00000206408, ENSG00000204438, ENSG00000223932, ENSG00000228605, ENSG00000232312, ENSG00000233210 GRCh38: Ensembl release 89: ENSG00000236011, ENSG00000206408, ENSG00000204438, ENSG00000223932, ENSG00000228605, ENSG00000232312, ENSG00000233210 – Ensembl, May 2017

[refGRCm38Ensembl-2] 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000092417 – Ensembl, May 2017

[3] "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[4] "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[pmid2911734-5] Spies T, Blanck G, Bresnahan M, Sands J, Strominger JL (Feb 1989). "A new cluster of genes within the human major histocompatibility complex". Science. 243 (4888): 214–7. Bibcode:1989Sci...243..214S. doi:10.1126/science.2911734. PMID 2911734.

[pmid2813433-6] Spies T, Bresnahan M, Strominger JL (Dec 1989). "Human major histocompatibility complex contains a minimum of 19 genes between the complement cluster and HLA-B". Proc Natl Acad Sci U S A. 86 (22): 8955–8. Bibcode:1989PNAS...86.8955S. doi:10.1073/pnas.86.22.8955. PMC 298409. PMID 2813433.

[entrez-7] 1 2 "Entrez Gene: BAT4 HLA-B associated transcript 4".

GPANK1

References

External links

Further reading