SPATC1L

SPATC1L

Identifiers

SPATC1L, C21orf56, spermatogenesis and centriole associated 1-like, spermatogenesis and centriole associated 1 like

External IDs

OMIM: 612412; MGI: 1923823; GeneCards: SPATC1L

Gene location (Human)

Chr.	Chromosome 21 (human)

Band	21q22.3	Start	46,161,148 bp
Band	21q22.3	End	46,184,476 bp

Gene location (Mouse)

Chr.	Chromosome 10 (mouse)

Band	10\|10 C1	Start	76,398,106 bp
Band	10\|10 C1	End	76,406,035 bp

RNA expression pattern

Human

Mouse (ortholog)

Top expressed in

right testis

left testis

left adrenal cortex

prostate

right adrenal cortex

putamen

temporal lobe

amygdala

nucleus accumbens

hippocampus proper

Top expressed in

seminiferous tubule

spermatid

parasympathetic nervous system

thyroid gland

pharynx

tongue

spermatocyte

embryo

submandibular gland

right kidney

More reference expression data

n/a

Gene ontology
Molecular function	protein binding molecular function
Cellular component	centrosome cellular component
Biological process	biological process
Sources:Amigo / QuickGO

Databases

NCBI: entry; OMA: entry

Species

Human

Mouse


84221


76573


ENSG00000160284 ENSG00000274679


ENSMUSG00000009115


Q9H0A9


Q9D9W0

RefSeq (mRNA)


NM_001142854 NM_032261


NM_029661 NM_001359186

RefSeq (protein)


NP_001136326 NP_115637


NP_083937 NP_001346115

Location (UCSC)

Chr 21: 46.16 – 46.18 Mb

Chr 10: 76.4 – 76.41 Mb

PubMed search

View/Edit Human

View/Edit Mouse

SPATC1L is a protein that in humans is encoded by the SPATC1L gene.

References

1 2 3 ENSG00000274679 GRCh38: Ensembl release 89: ENSG00000160284, ENSG00000274679 – Ensembl, May 2017
1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000009115 – Ensembl, May 2017
↑ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
↑ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
↑ "Entrez Gene: C21orf56 chromosome 21 open reading frame 56".

External links

Human SPATC1L genome location and SPATC1L gene details page in the UCSC Genome Browser.

Further reading

Mehrle A, Rosenfelder H, Schupp I, et al. (2006). "The LIFEdb database in 2006". Nucleic Acids Res. 34 (Database issue): D415–8. doi:10.1093/nar/gkj139. PMC 1347501. PMID 16381901.
Wiemann S, Arlt D, Huber W, et al. (2004). "From ORFeome to biology: a functional genomics pipeline". Genome Res. 14 (10B): 2136–44. doi:10.1101/gr.2576704. PMC 528930. PMID 15489336.
Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
Lehner B, Sanderson CM (2004). "A protein interaction framework for human mRNA degradation". Genome Res. 14 (7): 1315–23. doi:10.1101/gr.2122004. PMC 442147. PMID 15231747.
Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
Wiemann S, Weil B, Wellenreuther R, et al. (2001). "Toward a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs". Genome Res. 11 (3): 422–35. doi:10.1101/gr.GR1547R. PMC 311072. PMID 11230166.
Hartley JL, Temple GF, Brasch MA (2001). "DNA cloning using in vitro site-specific recombination". Genome Res. 10 (11): 1788–95. doi:10.1101/gr.143000. PMC 310948. PMID 11076863.
Hattori M, Fujiyama A, Taylor TD, et al. (2000). "The DNA sequence of human chromosome 21". Nature. 405 (6784): 311–9. Bibcode:2000Natur.405..311H. doi:10.1038/35012518. PMID 10830953.

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