Tubulin beta-4A chain
Protein-coding gene in the species Homo sapiens
Tubulin beta-4A chain is a protein that in humans is encoded by the TUBB4A gene . Two tubulin beta-4 chain proteins are encoded in the human genome by the genes TUBB4A (this entry) and TUBB4B . Tubulin is the major constituent of microtubules , a key components of the cytoskeleton . It binds two molecules of GTP , one at an exchangeable site on the beta-chain and one at a non-exchangeable site on the alpha-chain. TUBB4A is preferentially and highly expressed in the central nervous system.
References
1 2 3 GRCh38: Ensembl release 89: ENSG00000104833 – Ensembl , May 2017
1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000062591 – Ensembl , May 2017
↑ "Human PubMed Reference:" . National Center for Biotechnology Information, U.S. National Library of Medicine .
↑ "Mouse PubMed Reference:" . National Center for Biotechnology Information, U.S. National Library of Medicine .
↑ Hall JL, Dudley L, Dobner PR, Lewis SA, Cowan NJ (August 1983). "Identification of two human beta-tubulin isotypes" . Molecular and Cellular Biology . 3 (5): 854– 862. doi :10.1128/mcb.3.5.854 . PMC 368608 . PMID 6865944 .
↑ Lee MG, Loomis C, Cowan NJ (September 1984). "Sequence of an expressed human beta-tubulin gene containing ten Alu family members" . Nucleic Acids Research . 12 (14): 5823– 5836. doi :10.1093/nar/12.14.5823 . PMC 320034 . PMID 6462917 .
↑ "Entrez Gene: TUBB4 tubulin, beta 4" .
↑ "UCSC Genome Browser: TUBB4A microarray expression" .
↑ Hersheson J, Mencacci NE, Davis M, Macdonald N, Trabzuni D, Ryten M, et al. (December 2012). "Mutations in the autoregulatory domain of β-tubulin 4a cause hereditary dystonia" . Annals of Neurology . 73 (4): 546– 553. doi :10.1002/ana.23832 . PMC 3698699 . PMID 23424103 .
↑ Online Mendelian Inheritance in Man (OMIM): Dystonia 4, torsion, autosomal dominant; DYT4 - 128101
↑ Simons C, Wolf NI, McNeil N, Caldovic L, Devaney JM, Takanohashi A, et al. (May 2013). "A de novo mutation in the β-tubulin gene TUBB4A results in the leukoencephalopathy hypomyelination with atrophy of the basal ganglia and cerebellum" . American Journal of Human Genetics . 92 (5): 767– 773. doi :10.1016/j.ajhg.2013.03.018 . PMC 3644625 . PMID 23582646 .
↑ Online Mendelian Inheritance in Man (OMIM): Leukodystrophy, hypomyelinating, with atrophy of the basal ganglia and cerebellum; HABC - 128101
↑ Shimojima K, Okumura A, Ikeno M, Nishimura A, Saito A, Saitsu H, et al. (March 2015). "A de novo TUBB4A mutation in a patient with hypomyelination mimicking Pelizaeus-Merzbacher disease" . Brain & Development . 37 (3): 281– 285. doi :10.1016/j.braindev.2014.05.004 . PMID 24974158 .
Further reading
Wang D, Villasante A, Lewis SA, Cowan NJ (1987). "The mammalian beta-tubulin repertoire: hematopoietic expression of a novel, heterologous beta-tubulin isotype" . The Journal of Cell Biology . 103 (5): 1903– 1910. doi :10.1083/jcb.103.5.1903 . PMC 2114403 . PMID 3782288 .
Baumann MH, Wisniewski T, Levy E, Plant GT, Ghiso J (February 1996). "C-terminal fragments of alpha- and beta-tubulin form amyloid fibrils in vitro and associate with amyloid deposits of familial cerebral amyloid angiopathy, British type" . Biochemical and Biophysical Research Communications . 219 (1): 238– 242. doi :10.1006/bbrc.1996.0211 . PMID 8619814 .
Watts NR, Sackett DL, Ward RD, Miller MW, Wingfield PT, Stahl SS, et al. (July 2000). "HIV-1 rev depolymerizes microtubules to form stable bilayered rings" . The Journal of Cell Biology . 150 (2): 349– 360. doi :10.1083/jcb.150.2.349 . PMC 2180222 . PMID 10908577 .
Tarazona R, López-Lluch G, Galiani MD, Aguado E, Barahona F, Solana R, et al. (December 2000). "HLA-B2702 (77-83/83-77) peptide binds to beta-tubulin on human NK cells and blocks their cytotoxic capacity" . Journal of Immunology . 165 (12). Baltimore: 6776– 6782. doi :10.4049/jimmunol.165.12.6776 . PMID 11120798 .
Chen D, Wang M, Zhou S, Zhou Q (2004). "HIV-1 Tat targets microtubules to induce apoptosis, a process promoted by the pro-apoptotic Bcl-2 relative Bim" . The EMBO Journal . 21 (24): 6801– 6810. doi :10.1093/emboj/cdf683 . PMC 139103 . PMID 12486001 .
Zhang C, Dowd DR, Staal A, Gu C, Lian JB, van Wijnen AJ, et al. (September 2003). "Nuclear coactivator-62 kDa/Ski-interacting protein is a nuclear matrix-associated coactivator that may couple vitamin D receptor-mediated transcription and RNA splicing" . The Journal of Biological Chemistry . 278 (37): 35325– 35336. doi :10.1074/jbc.M305191200 . PMID 12840015 .
Bouwmeester T, Bauch A, Ruffner H, Angrand PO, Bergamini G, Croughton K, et al. (February 2004). "A physical and functional map of the human TNF-alpha/NF-kappa B signal transduction pathway". Nature Cell Biology . 6 (2): 97– 105. doi :10.1038/ncb1086 . PMID 14743216 . S2CID 11683986 .
Villacé P, Marión RM, Ortín J (2004). "The composition of Staufen-containing RNA granules from human cells indicates their role in the regulated transport and translation of messenger RNAs" . Nucleic Acids Research . 32 (8): 2411– 2420. doi :10.1093/nar/gkh552 . PMC 419443 . PMID 15121898 .
Hassel S, Eichner A, Yakymovych M, Hellman U, Knaus P, Souchelnytskyi S (May 2004). "Proteins associated with type II bone morphogenetic protein receptor (BMPR-II) and identified by two-dimensional gel electrophoresis and mass spectrometry". Proteomics . 4 (5): 1346– 1358. doi :10.1002/pmic.200300770 . PMID 15188402 . S2CID 6773754 .
Jin J, Smith FD, Stark C, Wells CD, Fawcett JP, Kulkarni S, et al. (August 2004). "Proteomic, functional, and domain-based analysis of in vivo 14-3-3 binding proteins involved in cytoskeletal regulation and cellular organization" . Current Biology . 14 (16): 1436– 1450. Bibcode :2004CBio...14.1436J . doi :10.1016/j.cub.2004.07.051 . PMID 15324660 .
Campbell GR, Pasquier E, Watkins J, Bourgarel-Rey V, Peyrot V, Esquieu D, et al. (November 2004). "The glutamine-rich region of the HIV-1 Tat protein is involved in T-cell apoptosis" . The Journal of Biological Chemistry . 279 (46): 48197– 48204. doi :10.1074/jbc.M406195200 . PMID 15331610 .
de Mareuil J, Carre M, Barbier P, Campbell GR, Lancelot S, Opi S, et al. (February 2005). "HIV-1 Tat protein enhances microtubule polymerization" . Retrovirology . 2 (1) 5. doi :10.1186/1742-4690-2-5 . PMC 549075 . PMID 15691386 .
Giacca M (February 2005). "HIV-1 Tat, apoptosis and the mitochondria: a tubulin link?" . Retrovirology . 2 (1) 7. doi :10.1186/1742-4690-2-7 . PMC 549042 . PMID 15698476 .
Otsuki T, Ota T, Nishikawa T, Hayashi K, Suzuki Y, Yamamoto J, et al. (2005). "Signal sequence and keyword trap in silico for selection of full-length human cDNAs encoding secretion or membrane proteins from oligo-capped cDNA libraries" . DNA Research . 12 (2): 117– 126. doi :10.1093/dnares/12.2.117 . PMID 16303743 .
Coiras M, Camafeita E, Ureña T, López JA, Caballero F, Fernández B, et al. (April 2006). "Modifications in the human T cell proteome induced by intracellular HIV-1 Tat protein expression". Proteomics . 6 Suppl 1 (Suppl 1): S63–73. doi :10.1002/pmic.200500437 . PMID 16526095 . S2CID 42878271 .
External links
PDB gallery
1ffx : TUBULIN:STATHMIN-LIKE DOMAIN COMPLEX
1ia0 : KIF1A HEAD-MICROTUBULE COMPLEX STRUCTURE IN ATP-FORM
1jff : Refined structure of alpha-beta tubulin from zinc-induced sheets stabilized with taxol
1sa0 : TUBULIN-COLCHICINE: STATHMIN-LIKE DOMAIN COMPLEX
1sa1 : Tubulin-podophyllotoxin: stathmin-like domain complex
1tub : TUBULIN ALPHA-BETA DIMER, ELECTRON DIFFRACTION
1tvk : The binding mode of epothilone A on a,b-tubulin by electron crystallography
1z2b : Tubulin-colchicine-vinblastine: stathmin-like domain complex
2hxf : KIF1A head-microtubule complex structure in amppnp-form
2hxh : KIF1A head-microtubule complex structure in adp-form