YASARA

Yet Another Scientific Artificial Reality Application (YASARA) is a computer program for molecular visualization, modelling and dynamics. It has many scientific uses, as expressed by the large number of scientific articles mentioning the software. The free version of YASARA is well suited to bioinformatics education. A series of freely available bioinformatics courses exist that use this software; see examples thereof at the Center for Molecular and Biomolecular Informatics (CMBI) education pages.

See also

• List of molecular graphics systems
• Comparison of software for molecular mechanics modeling
• Molecular graphics
• Molecular design software

References

Bibliography

• Krieger E, Koraimann G, Vriend G (May 2002). "Increasing the precision of comparative models with YASARA NOVA—a self-parameterizing force field". Proteins. 47 (3): 393–402. doi:10.1002/prot.10104. PMID 11948792.
• Modelling: Krieger E, Vriend G (Feb 2002). "Models@Home: distributed computing in bioinformatics using a screensaver based approach". Bioinformatics. 18 (2): 315–8. doi:10.1093/bioinformatics/18.2.315. PMID 11847079.
• Dynamics: Krieger E, Darden T, Nabuurs SB, Finkelstein A, Vriend G (Dec 2004). "Making optimal use of empirical energy functions: force-field parameterization in crystal space". Proteins. 57 (4): 678–83. doi:10.1002/prot.20251. PMID 15390263.

External links

• Official website

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