ZKSCAN1

ZKSCAN1

Identifiers

ZKSCAN1, 9130423L19Rik, KOX18, PHZ-37, ZNF139, ZNF36, ZSCAN33, zinc finger with KRAB and SCAN domains 1

External IDs

OMIM: 601260; MGI: 1921820; GeneCards: ZKSCAN1

Gene location (Human)

Chr.	Chromosome 7 (human)

Band	7q22.1	Start	100,015,572 bp
Band	7q22.1	End	100,041,689 bp

Gene location (Mouse)

Chr.	Chromosome 5 (mouse)

Band	5\|5 G2	Start	138,083,346 bp
Band	5\|5 G2	End	138,106,084 bp

RNA expression pattern

Human

Mouse (ortholog)

Top expressed in

skin of thigh

bronchial epithelial cell

skin of hip

inferior ganglion of vagus nerve

external globus pallidus

subthalamic nucleus

pars reticulata

pylorus

pars compacta

cardia

Top expressed in

medullary collecting duct

hand

condyle

genital tubercle

urothelium

cumulus cell

fossa

transitional epithelium of urinary bladder

vas deferens

renal corpuscle

More reference expression data


More reference expression data

Gene ontology
Molecular function	protein binding nucleic acid binding metal ion binding DNA binding DNA-binding transcription factor activity DNA-binding transcription factor activity, RNA polymerase II-specific
Cellular component	intracellular anatomical structure nucleus
Biological process	regulation of transcription, DNA-templated transcription, DNA-templated regulation of transcription by RNA polymerase II
Sources:Amigo / QuickGO

Databases

NCBI: entry; OMA: entry

Species

Human

Mouse


7586


74570


ENSG00000106261


ENSMUSG00000029729


P17029


Q8BGS3

RefSeq (mRNA)

NM_001287054 NM_001287055 NM_003439 NM_001346579 NM_001346580
NM_001346581


NM_029869 NM_133906

RefSeq (protein)

NP_001273983 NP_001273984 NP_001333508 NP_001333509 NP_001333510
NP_003430


NP_084145 NP_598667

Location (UCSC)

Chr 7: 100.02 – 100.04 Mb

Chr 5: 138.08 – 138.11 Mb

PubMed search

View/Edit Human

View/Edit Mouse

Zinc finger protein with KRAB and SCAN domains 1 is a protein that in humans is encoded by the ZKSCAN1 gene.

See also

References

1 2 3 GRCh38: Ensembl release 89: ENSG00000106261 – Ensembl, May 2017
1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000029729 – Ensembl, May 2017
↑ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
↑ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
↑ "Entrez Gene: ZKSCAN1 zinc finger with KRAB and SCAN domains 1".

Further reading

Huebner K, Druck T, Croce CM, Thiesen HJ (1991). "Twenty-seven nonoverlapping zinc finger cDNAs from human T cells map to nine different chromosomes with apparent clustering". Am. J. Hum. Genet. 48 (4): 726–40. PMC 1682948. PMID 2014798.
Thiesen HJ (1991). "Multiple genes encoding zinc finger domains are expressed in human T cells". New Biol. 2 (4): 363–74. PMID 2288909.
Rousseau-Merck MF, Duro D, Berger R, Thiesen HJ (1995). "Chromosomal localization of two KOX zinc finger genes on chromosome bands 7q21-q22". Ann. Genet. 38 (2): 81–4. PMID 7486829.
Tommerup N, Vissing H (1995). "Isolation and fine mapping of 16 novel human zinc finger-encoding cDNAs identify putative candidate genes for developmental and malignant disorders". Genomics. 27 (2): 259–64. doi:10.1006/geno.1995.1040. PMID 7557990.
Strausberg RL; Feingold EA; Grouse LH; et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
Scherer SW; Cheung J; MacDonald JR; et al. (2003). "Human Chromosome 7: DNA Sequence and Biology". Science. 300 (5620): 767–72. Bibcode:2003Sci...300..767S. doi:10.1126/science.1083423. PMC 2882961. PMID 12690205.
Jikuya H; Takano J; Kikuno R; et al. (2003). "Characterization of long cDNA clones from human adult spleen. II. The complete sequences of 81 cDNA clones". DNA Res. 10 (1): 49–57. doi:10.1093/dnares/10.1.49. PMID 12693554.
Ota T; Suzuki Y; Nishikawa T; et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
Gerhard DS; Wagner L; Feingold EA; et al. (2004). "The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
Olsen JV; Blagoev B; Gnad F; et al. (2006). "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks". Cell. 127 (3): 635–48. doi:10.1016/j.cell.2006.09.026. PMID 17081983. S2CID 7827573.

This article on a gene on human chromosome 7 is a stub. You can help Wikipedia by adding missing information.