ZSCAN21

ZSCAN21

Identifiers

ZSCAN21, NY-REN-21, ZNF38, Zipro1, zinc finger and SCAN domain containing 21

External IDs

OMIM: 601261; MGI: 99182; GeneCards: ZSCAN21

Gene location (Human)

Chr.	Chromosome 7 (human)

Band	7q22.1	Start	100,049,774 bp
Band	7q22.1	End	100,065,040 bp

Gene location (Mouse)

Chr.	Chromosome 5 (mouse)

Band	5 G2\|5 76.96 cM	Start	138,115,165 bp
Band	5 G2\|5 76.96 cM	End	138,132,527 bp

RNA expression pattern

Human

Mouse (ortholog)

Top expressed in

oocyte

secondary oocyte

gonad

parotid gland

ventricular zone

testicle

ganglionic eminence

endothelial cell

right uterine tube

gastrocnemius muscle

Top expressed in

otic vesicle

saccule

seminiferous tubule

Rostral migratory stream

medullary collecting duct

maxillary prominence

otic placode

fossa

ganglionic eminence

mandibular prominence

More reference expression data


More reference expression data

Gene ontology
Molecular function	DNA-binding transcription factor activity RNA polymerase II cis-regulatory region sequence-specific DNA binding DNA binding DNA-binding transcription activator activity, RNA polymerase II-specific protein binding metal ion binding nucleic acid binding DNA-binding transcription factor activity, RNA polymerase II-specific
Cellular component	nucleus
Biological process	positive regulation of transcription, DNA-templated regulation of transcription, DNA-templated positive regulation of transcription by RNA polymerase II transcription, DNA-templated transcription by RNA polymerase II
Sources:Amigo / QuickGO

Databases

NCBI: entry; OMA: entry

Species

Human

Mouse


7589


22697


ENSG00000166529


ENSMUSG00000037017


Q9Y5A6


Q07231

RefSeq (mRNA)


NM_145914 NM_001362779 NM_001362780 NM_001362781


NM_001044703 NM_001044704 NM_001044705 NM_011757

RefSeq (protein)


NP_666019 NP_001349708 NP_001349709 NP_001349710


NP_001038168 NP_001038169 NP_001038170 NP_035887

Location (UCSC)

Chr 7: 100.05 – 100.07 Mb

Chr 5: 138.12 – 138.13 Mb

PubMed search

View/Edit Human

View/Edit Mouse

Zinc finger and SCAN domain-containing protein 21 is a protein that in humans is encoded by the ZSCAN21 gene.

References

1 2 3 GRCh38: Ensembl release 89: ENSG00000166529 – Ensembl, May 2017
1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000037017 – Ensembl, May 2017
↑ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
↑ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
↑ Thiesen HJ (Mar 1991). "Multiple genes encoding zinc finger domains are expressed in human T cells". New Biol. 2 (4): 363–374. PMID 2288909.
↑ Huebner K, Druck T, Croce CM, Thiesen HJ (May 1991). "Twenty-seven nonoverlapping zinc finger cDNAs from human T cells map to nine different chromosomes with apparent clustering". Am J Hum Genet. 48 (4): 726–740. PMC 1682948. PMID 2014798.
↑ "Entrez Gene: ZSCAN21 zinc finger and SCAN domain containing 21".

Further reading

Carneiro FR; Silva TC; Alves AC; et al. (2006). "Spectroscopic characterization of the tumor antigen NY-REN-21 and identification of heterodimer formation with SCAND1". Biochem. Biophys. Res. Commun. 343 (1): 260–268. doi:10.1016/j.bbrc.2006.02.140. PMID 16540086.
Gerhard DS; Wagner L; Feingold EA; et al. (2004). "The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–2127. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
Scherer SW; Cheung J; MacDonald JR; et al. (2003). "Human Chromosome 7: DNA Sequence and Biology". Science. 300 (5620): 767–772. Bibcode:2003Sci...300..767S. doi:10.1126/science.1083423. PMC 2882961. PMID 12690205.
Strausberg RL; Feingold EA; Grouse LH; et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–16903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
Wiemann S; Weil B; Wellenreuther R; et al. (2001). "Toward a Catalog of Human Genes and Proteins: Sequencing and Analysis of 500 Novel Complete Protein Coding Human cDNAs". Genome Res. 11 (3): 422–435. doi:10.1101/gr.GR1547R. PMC 311072. PMID 11230166.

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