Atopobiaceae

Atopobiaceae
Scientific classification
Domain:	Bacteria
Kingdom:	Bacillati
Phylum:	Actinomycetota
Class:	Coriobacteriia
Order:	Coriobacteriales
Family:	Atopobiaceae; Gupta et al. 2013
Genera
	See text
Synonyms
	Kribbibacteriaceae Bai et al. 2024;

The Atopobiaceae are a family of bacteria in the phylum Actinomycetota.

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information (NCBI).

Nouioui et al. 2018

16S rRNA based LTP_10_2024

120 marker proteins based GTDB 10-RS226

Atopobiaceae

Fannyhessea

Lancefieldella

	Atopobium

	Olsenella

Atopobiaceae

	Leptogranulimonas

	Muricaecibacterium Afrizal et al. 2023

Fannyhessea

	Lancefieldella

	Atopobium

Granulimonas

Parolsenella

	Paratractidigestivibacter

	Tractidigestivibacter

Parafannyhessea

	Thermophilibacter

	Olsenella

Atopobiaceae

Kribbibacterium Bai et al. 2024

	Granulimonas Morinaga et al. 2022

	Leptogranulimonas Morinaga et al. 2022

Parolsenella Sakamoto et al. 2018

	"Ca. Coprovicinus" Gilroy et al. 2021

	Atopobium Collins & Wallbanks 1993

"Olegusella" Diop et al. 2016

Fannyhessea Nouioui et al. 2018

	Olsenella porci Wylensek et al. 2021

	Parafannyhessea Zgheib et al. 2021

Olsenella Dewhirst et al. 2001

Tractidigestivibacter Zgheib et al. 2021

Lancefieldella Nouioui et al. 2018

	Paratractidigestivibacter Zgheib et al. 2021

	Thermophilibacter Zgheib et al. 2021

Unassigned genus:

Caniella Afrizal et al. 2023

References

1 2 Gupta RS, Chen WJ, Adeolu M, Chai Y (2013). "Molecular signatures for the class Coriobacteriia and its different clades; Proposal for division of the class Coriobacteriia into the emended order Coriobacteriales, containing the emended family Coriobacteriaceae and Atopobiaceae fam. nov., and Eggerthellales ord. nov., containing the family Eggerthellaceae fam. nov". Int J Syst Evol Microbiol. 63 (Pt 9): 3379–3397. doi:10.1099/ijs.0.048371-0. PMID 23524353.
1 2 3 Atopobiaceae in LPSN; Freese, H. M.; Meier-Kolthoff, J. P.; Sardà Carbasse, J.; Afolayan, A. O.; Göker, M. (2026). "TYGS and LPSN in 2025: a Global Core Biodata Resource for genome-based classification and nomenclature of prokaryotes within DSMZ Digital Diversity". Nucleic Acids Research. 54 (D1): D884–D891. doi:10.1093/nar/gkaf1110.
1 2 C.L. Schoch; et al. "Atopobiaceae". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2025-02-28.
↑ Nouioui I, Carro L, García-López M, Meier-Kolthoff JP, Woyke T, Kyrpides NC, Pukall R, Klenk HP, Goodfellow M, Markus Göker M (2018). "Genome-Based Taxonomic Classification of the Phylum Actinobacteria". Front. Microbiol. 9: 2007. doi:10.3389/fmicb.2018.02007. PMC 6113628. PMID 30186281.
↑ "The LTP". Retrieved 10 December 2024.
↑ "LTP_all tree in newick format". Retrieved 10 December 2024.
↑ "LTP_10_2024 Release Notes" (PDF). Retrieved 10 December 2024.
↑ "GTDB release 10-RS226". Genome Taxonomy Database. Retrieved 1 May 2025.
↑ "bac120_r226.sp_label". Genome Taxonomy Database. Retrieved 1 May 2025.
↑ "Taxon History". Genome Taxonomy Database. Retrieved 1 May 2025.

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[Gupta-1] 1 2 Gupta RS, Chen WJ, Adeolu M, Chai Y (2013). "Molecular signatures for the class Coriobacteriia and its different clades; Proposal for division of the class Coriobacteriia into the emended order Coriobacteriales, containing the emended family Coriobacteriaceae and Atopobiaceae fam. nov., and Eggerthellales ord. nov., containing the family Eggerthellaceae fam. nov". Int J Syst Evol Microbiol. 63 (Pt 9): 3379–3397. doi:10.1099/ijs.0.048371-0. PMID 23524353.

[LPSN-2] 1 2 3 Atopobiaceae in LPSN; Freese, H. M.; Meier-Kolthoff, J. P.; Sardà Carbasse, J.; Afolayan, A. O.; Göker, M. (2026). "TYGS and LPSN in 2025: a Global Core Biodata Resource for genome-based classification and nomenclature of prokaryotes within DSMZ Digital Diversity". Nucleic Acids Research. 54 (D1): D884–D891. doi:10.1093/nar/gkaf1110.

[NCBI-3] 1 2 C.L. Schoch; et al. "Atopobiaceae". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2025-02-28.

[Nouioui-4] Nouioui I, Carro L, García-López M, Meier-Kolthoff JP, Woyke T, Kyrpides NC, Pukall R, Klenk HP, Goodfellow M, Markus Göker M (2018). "Genome-Based Taxonomic Classification of the Phylum Actinobacteria". Front. Microbiol. 9: 2007. doi:10.3389/fmicb.2018.02007. PMC 6113628. PMID 30186281.

[5] "The LTP". Retrieved 10 December 2024.

[6] "LTP_all tree in newick format". Retrieved 10 December 2024.

[7] "LTP_10_2024 Release Notes" (PDF). Retrieved 10 December 2024.

[about-8] "GTDB release 10-RS226". Genome Taxonomy Database. Retrieved 1 May 2025.

[tree_bac-9] "bac120_r226.sp_label". Genome Taxonomy Database. Retrieved 1 May 2025.

[taxon_history-10] "Taxon History". Genome Taxonomy Database. Retrieved 1 May 2025.