Patulibacter

Patulibacter
Scientific classification
Domain:	Bacteria
Kingdom:	Bacillati
Phylum:	Actinomycetota
Class:	Thermoleophilia
Order:	Solirubrobacterales
Family:	Patulibacteraceae; Takahashi et al. 2006
Genus:	Patulibacter; Takahashi et al. 2006
Type species
	Patulibacter minatonensis; Takahashi et al. 2006
Species
	P. americanus; P. brassicae; "P. defluvii"; P. ginsengiterrae; P. medicamentivorans; P. minatonensis;

Patulibacter is a genus of bacteria from the family Patulibacteraceae.

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) and National Center for Biotechnology Information (NCBI).

16S rRNA based LTP_10_2024

120 marker proteins based GTDB 10-RS226

Patulibacter

	P. brassicae Jin et al. 2016

	P. medicamentivorans Almeida et al. 2013

P. ginsengiterrae Kim et al. 2012

	P. americanus Reddy and Garcia-Pichel 2009

	P. minatonensis Takahashi et al. 2006

Patulibacter

	P. brassicae

	P. medicamentivorans

	P. americanus

	P. minatonensis

References

1 2 Takahashi Y, Matsumoto A, Morisaki K, Omura S (2006). "Patulibacter minatonensis gen. nov., sp. nov., a novel actinobacterium isolated using an agar medium supplemented with superoxide dismutase, and proposal of Patulibacteraceae fam. nov". Int J Syst Evol Microbiol. 56 (Pt 2): 401–406. doi:10.1099/ijs.0.63796-0. PMID 16449447.
1 2 3 Patulibacter in LPSN; Freese, H. M.; Meier-Kolthoff, J. P.; Sardà Carbasse, J.; Afolayan, A. O.; Göker, M. (2026). "TYGS and LPSN in 2025: a Global Core Biodata Resource for genome-based classification and nomenclature of prokaryotes within DSMZ Digital Diversity". Nucleic Acids Research. 54 (D1): D884–D891. doi:10.1093/nar/gkaf1110.
1 2 C.L. Schoch; et al. "Patulibacter". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2025-02-28.
↑ "Patulibacter". www.uniprot.org.
↑ Parker, Charles Thomas; Wigley, Sarah; Garrity, George M (2009). Parker, Charles Thomas; Garrity, George M (eds.). "Nomenclature Abstract for Patulibacter Takahashi et al. 2006 emend. Kim et al. 2012". The NamesforLife Abstracts. doi:10.1601/nm.9873.
↑ "The LTP". Retrieved 10 December 2024.
↑ "LTP_all tree in newick format". Retrieved 10 December 2024.
↑ "LTP_10_2024 Release Notes" (PDF). Retrieved 10 December 2024.
↑ "GTDB release 10-RS226". Genome Taxonomy Database. Retrieved 1 May 2025.
↑ "bac120_r226.sp_label". Genome Taxonomy Database. Retrieved 1 May 2025.
↑ "Taxon History". Genome Taxonomy Database. Retrieved 1 May 2025.

Jin, D.; Kong, X.; Li, H.; Luo, L.; Zhuang, X.; Zhuang, G.; Deng, Y.; Bai, Z. (1 December 2016). "Patulibacter brassicae sp. nov., isolated from rhizosphere soil of Chinese cabbage (Brassica campestris)". International Journal of Systematic and Evolutionary Microbiology. 66 (12): 5056–5060. doi:10.1099/ijsem.0.001469. PMID 27620694.
Takahashi, Y. (1 February 2006). "Patulibacter minatonensis gen. nov., sp. nov., a novel actinobacterium isolated using an agar medium supplemented with superoxide dismutase, and proposal of Patulibacteraceae fam. nov". International Journal of Systematic and Evolutionary Microbiology. 56 (2): 401–406. doi:10.1099/ijs.0.63796-0. PMID 16449447.
Reddy, G. S. N.; Garcia-Pichel, F. (1 January 2009). "Description of Patulibacter americanus sp. nov., isolated from biological soil crusts, emended description of the genus Patulibacter Takahashi et al. 2006 and proposal of Solirubrobacterales ord. nov. and Thermoleophilales ord. nov". International Journal of Systematic and Evolutionary Microbiology. 59 (1): 87–94. doi:10.1099/ijs.0.64185-0. PMID 19126730.

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[Takahashi-1] 1 2 Takahashi Y, Matsumoto A, Morisaki K, Omura S (2006). "Patulibacter minatonensis gen. nov., sp. nov., a novel actinobacterium isolated using an agar medium supplemented with superoxide dismutase, and proposal of Patulibacteraceae fam. nov". Int J Syst Evol Microbiol. 56 (Pt 2): 401–406. doi:10.1099/ijs.0.63796-0. PMID 16449447.

[LPSN-2] 1 2 3 Patulibacter in LPSN; Freese, H. M.; Meier-Kolthoff, J. P.; Sardà Carbasse, J.; Afolayan, A. O.; Göker, M. (2026). "TYGS and LPSN in 2025: a Global Core Biodata Resource for genome-based classification and nomenclature of prokaryotes within DSMZ Digital Diversity". Nucleic Acids Research. 54 (D1): D884–D891. doi:10.1093/nar/gkaf1110.

[NCBI-3] 1 2 C.L. Schoch; et al. "Patulibacter". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2025-02-28.

[4] "Patulibacter". www.uniprot.org.

[5] Parker, Charles Thomas; Wigley, Sarah; Garrity, George M (2009). Parker, Charles Thomas; Garrity, George M (eds.). "Nomenclature Abstract for Patulibacter Takahashi et al. 2006 emend. Kim et al. 2012". The NamesforLife Abstracts. doi:10.1601/nm.9873.

[6] "The LTP". Retrieved 10 December 2024.

[7] "LTP_all tree in newick format". Retrieved 10 December 2024.

[8] "LTP_10_2024 Release Notes" (PDF). Retrieved 10 December 2024.

[about-9] "GTDB release 10-RS226". Genome Taxonomy Database. Retrieved 1 May 2025.

[tree_bac-10] "bac120_r226.sp_label". Genome Taxonomy Database. Retrieved 1 May 2025.

[taxon_history-11] "Taxon History". Genome Taxonomy Database. Retrieved 1 May 2025.

Patulibacter

Phylogeny

See also

References

Further reading